Cluster: CGMR092182_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR092182
- CGC Family ID: CGCFAM_00472
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_110007 | k141_110007_2 | 774 | 2963 | + | CBM48 | GH13_9 |
| CAZyme | k141_110007 | k141_110007_3 | 2988 | 5066 | + | CBM48 | GH13_11 |
| CAZyme | k141_110007 | k141_110007_4 | 5076 | 7220 | + | GH77 |
| NULL(UNKNOWN) | k141_110007 | k141_110007_5 | 7817 | 8158 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_110007 | k141_110007_6 | 8212 | 8784 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_110007 | k141_110007_7 | 8866 | 11130 | - | 2.A.1.42.2 |
Gene ID: k141_110007_2
Type: CAZyme
Location: 774 - 2963 (+)
Type: CAZyme
Location: 774 - 2963 (+)
Gene ID: k141_110007_3
Type: CAZyme
Location: 2988 - 5066 (+)
Type: CAZyme
Location: 2988 - 5066 (+)
Gene ID: k141_110007_4
Type: CAZyme
Location: 5076 - 7220 (+)
Type: CAZyme
Location: 5076 - 7220 (+)
Gene ID: k141_110007_5
Type:
Location: 7817 - 8158 (+)
Type:
Location: 7817 - 8158 (+)
Gene ID: k141_110007_6
Type:
Location: 8212 - 8784 (-)
Type:
Location: 8212 - 8784 (-)
Gene ID: k141_110007_7
Type: TC
Location: 8866 - 11130 (-)
Type: TC
Location: 8866 - 11130 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
MGBC133411
Species
MGBC133411 sp910585375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.