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Cluster: CGMR092066_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1072826 k141_1072826_21 26401 28989 - 3.A.9.1.2
pfam k141_1072826 k141_1072826_22 29169 31832 + DNA_topoisoIV | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C
STP k141_1072826 k141_1072826_23 31894 33159 + TPR_1
CAZyme k141_1072826 k141_1072826_24 33377 35416 + GH20
pfam k141_1072826 k141_1072826_25 35509 36066 + Flavodoxin_2 | FMN_red
pfam k141_1072826 k141_1072826_26 36078 37232 - DUF5128
TC k141_1072826 k141_1072826_27 37269 38204 - 2.A.4.7.9
TC k141_1072826 k141_1072826_28 38279 39742 - 2.A.35.1.6
Gene ID: k141_1072826_21
Type: TC
Location: 26401 - 28989 (-)
Gene ID: k141_1072826_22
Type: pfam
Location: 29169 - 31832 (+)
Gene ID: k141_1072826_23
Type: STP
Location: 31894 - 33159 (+)
Gene ID: k141_1072826_24
Type: CAZyme
Location: 33377 - 35416 (+)
Gene ID: k141_1072826_25
Type: pfam
Location: 35509 - 36066 (+)
Gene ID: k141_1072826_26
Type: pfam
Location: 36078 - 37232 (-)
Gene ID: k141_1072826_27
Type: TC
Location: 37269 - 38204 (-)
Gene ID: k141_1072826_28
Type: TC
Location: 38279 - 39742 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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