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Cluster: CGMR092066_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_672667 k141_672667_17 16260 18056 - 1.B.14.3.3
sulfatase k141_672667 k141_672667_18 18374 19975 + S1_11
CAZyme k141_672667 k141_672667_19 20014 21762 + GH29
pfam k141_672667 k141_672667_20 21954 22832 + Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
pfam k141_672667 k141_672667_21 22854 23996 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd | GDP_Man_Dehyd
TC k141_672667 k141_672667_22 24024 25205 + 2.A.1.46.5
pfam k141_672667 k141_672667_23 25206 26075 - MatE
TC k141_672667 k141_672667_24 26163 26540 - 2.A.66.1.7
Gene ID: k141_672667_17
Type: TC
Location: 16260 - 18056 (-)
Gene ID: k141_672667_18
Type: sulfatase
Location: 18374 - 19975 (+)
Gene ID: k141_672667_19
Type: CAZyme
Location: 20014 - 21762 (+)
Gene ID: k141_672667_20
Type: pfam
Location: 21954 - 22832 (+)
Gene ID: k141_672667_21
Type: pfam
Location: 22854 - 23996 (+)
Gene ID: k141_672667_22
Type: TC
Location: 24024 - 25205 (+)
Gene ID: k141_672667_23
Type: pfam
Location: 25206 - 26075 (-)
Gene ID: k141_672667_24
Type: TC
Location: 26163 - 26540 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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