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Cluster: CGMR091780_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_110355 k141_110355_5 3874 5094 + 9.B.146.1.3
pfam k141_110355 k141_110355_6 5095 6429 + Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N
TC k141_110355 k141_110355_7 6438 7643 + 2.A.103.1.2
CAZyme k141_110355 k141_110355_8 7618 8724 + GT28
pfam k141_110355 k141_110355_9 8721 10061 + Mur_ligase | Mur_ligase_C | Mur_ligase_M
NULL(UNKNOWN) k141_110355 k141_110355_10 10051 10794 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_110355 k141_110355_11 10784 12136 + 9.B.157.1.3
Gene ID: k141_110355_5
Type: TC
Location: 3874 - 5094 (+)
Gene ID: k141_110355_6
Type: pfam
Location: 5095 - 6429 (+)
Gene ID: k141_110355_7
Type: TC
Location: 6438 - 7643 (+)
Gene ID: k141_110355_8
Type: CAZyme
Location: 7618 - 8724 (+)
Gene ID: k141_110355_9
Type: pfam
Location: 8721 - 10061 (+)
Gene ID: k141_110355_10
Type:
Location: 10051 - 10794 (+)
Gene ID: k141_110355_11
Type: TC
Location: 10784 - 12136 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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