Cluster: CGMR091600_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR091600
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_126919 | k141_126919_8 | 6289 | 7368 | + | GH172 |
| CAZyme | k141_126919 | k141_126919_9 | 7564 | 10179 | + | GH116 |
| NULL(UNKNOWN) | k141_126919 | k141_126919_10 | 10325 | 10477 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_126919 | k141_126919_11 | 10678 | 11010 | - | DUF1540 | DUF1540 |
| TC | k141_126919 | k141_126919_12 | 11211 | 12050 | + | 3.A.1.3.10 |
| TC | k141_126919 | k141_126919_13 | 12188 | 12826 | + | 3.A.1.3.11 |
| TC | k141_126919 | k141_126919_14 | 12837 | 13580 | + | 3.A.1.3.15 |
Gene ID: k141_126919_8
Type: CAZyme
Location: 6289 - 7368 (+)
Type: CAZyme
Location: 6289 - 7368 (+)
Gene ID: k141_126919_9
Type: CAZyme
Location: 7564 - 10179 (+)
Type: CAZyme
Location: 7564 - 10179 (+)
Gene ID: k141_126919_10
Type:
Location: 10325 - 10477 (+)
Type:
Location: 10325 - 10477 (+)
Gene ID: k141_126919_11
Type: pfam
Location: 10678 - 11010 (-)
Type: pfam
Location: 10678 - 11010 (-)
Gene ID: k141_126919_12
Type: TC
Location: 11211 - 12050 (+)
Type: TC
Location: 11211 - 12050 (+)
Gene ID: k141_126919_13
Type: TC
Location: 12188 - 12826 (+)
Type: TC
Location: 12188 - 12826 (+)
Gene ID: k141_126919_14
Type: TC
Location: 12837 - 13580 (+)
Type: TC
Location: 12837 - 13580 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.