Cluster: CGMR091600_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR091600
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_309447 | k141_309447_4 | 3258 | 4775 | - | GH51_1 |
| TF | k141_309447 | k141_309447_5 | 4924 | 5973 | + | LacI |
| CAZyme | k141_309447 | k141_309447_6 | 6212 | 7060 | - | CE4 |
| TC | k141_309447 | k141_309447_7 | 7410 | 7823 | - | 1.A.22.1.8 |
| TF | k141_309447 | k141_309447_8 | 8071 | 8565 | + | MarR |
| TC | k141_309447 | k141_309447_9 | 8562 | 10283 | + | 3.A.1.135.7 |
| TC | k141_309447 | k141_309447_10 | 10276 | 11580 | + | 3.A.1.135.5 |
Gene ID: k141_309447_4
Type: CAZyme
Location: 3258 - 4775 (-)
Type: CAZyme
Location: 3258 - 4775 (-)
Gene ID: k141_309447_5
Type: TF
Location: 4924 - 5973 (+)
Type: TF
Location: 4924 - 5973 (+)
Gene ID: k141_309447_6
Type: CAZyme
Location: 6212 - 7060 (-)
Type: CAZyme
Location: 6212 - 7060 (-)
Gene ID: k141_309447_7
Type: TC
Location: 7410 - 7823 (-)
Type: TC
Location: 7410 - 7823 (-)
Gene ID: k141_309447_8
Type: TF
Location: 8071 - 8565 (+)
Type: TF
Location: 8071 - 8565 (+)
Gene ID: k141_309447_9
Type: TC
Location: 8562 - 10283 (+)
Type: TC
Location: 8562 - 10283 (+)
Gene ID: k141_309447_10
Type: TC
Location: 10276 - 11580 (+)
Type: TC
Location: 10276 - 11580 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.