Cluster: CGMR091517_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR091517
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_147390 | k141_147390_9 | 9225 | 11015 | + | GH2 |
| pfam | k141_147390 | k141_147390_10 | 11151 | 12728 | - | tRNA-synt_1c | Anticodon_2 |
| pfam | k141_147390 | k141_147390_11 | 12809 | 14596 | - | LRR_5 | LRR_5 |
| TC | k141_147390 | k141_147390_12 | 14640 | 15275 | - | 3.A.1.19.2 |
| TC | k141_147390 | k141_147390_13 | 15265 | 16860 | - | 3.A.1.19.2 |
| TC | k141_147390 | k141_147390_14 | 16926 | 17939 | - | 3.A.1.19.2 |
Gene ID: k141_147390_9
Type: CAZyme
Location: 9225 - 11015 (+)
Type: CAZyme
Location: 9225 - 11015 (+)
Gene ID: k141_147390_10
Type: pfam
Location: 11151 - 12728 (-)
Type: pfam
Location: 11151 - 12728 (-)
Gene ID: k141_147390_11
Type: pfam
Location: 12809 - 14596 (-)
Type: pfam
Location: 12809 - 14596 (-)
Gene ID: k141_147390_12
Type: TC
Location: 14640 - 15275 (-)
Type: TC
Location: 14640 - 15275 (-)
Gene ID: k141_147390_13
Type: TC
Location: 15265 - 16860 (-)
Type: TC
Location: 15265 - 16860 (-)
Gene ID: k141_147390_14
Type: TC
Location: 16926 - 17939 (-)
Type: TC
Location: 16926 - 17939 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D bryantii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.