Cluster: CGMR091517_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR091517
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1506601 | k141_1506601_29 | 28407 | 30713 | - | 3.A.20.1.5 |
| STP | k141_1506601 | k141_1506601_30 | 30783 | 31496 | - | Sigma70_r2 | Sigma70_r4 |
| pfam | k141_1506601 | k141_1506601_31 | 31775 | 32902 | - | LRR_5 | LRR_5 |
| CAZyme | k141_1506601 | k141_1506601_32 | 33025 | 34110 | + | GH5_36 |
Gene ID: k141_1506601_29
Type: TC
Location: 28407 - 30713 (-)
Type: TC
Location: 28407 - 30713 (-)
Gene ID: k141_1506601_30
Type: STP
Location: 30783 - 31496 (-)
Type: STP
Location: 30783 - 31496 (-)
Gene ID: k141_1506601_31
Type: pfam
Location: 31775 - 32902 (-)
Type: pfam
Location: 31775 - 32902 (-)
Gene ID: k141_1506601_32
Type: CAZyme
Location: 33025 - 34110 (+)
Type: CAZyme
Location: 33025 - 34110 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D bryantii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.