Cluster: CGMR091517_CGC40
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR091517
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_262323 | k141_262323_15 | 13125 | 14261 | - | 3.B.1.1.5 |
| TC | k141_262323 | k141_262323_16 | 14304 | 15632 | - | 2.A.45.2.2 |
| TC | k141_262323 | k141_262323_17 | 15888 | 17234 | + | 2.A.66.1.33 |
| STP | k141_262323 | k141_262323_18 | 17479 | 18720 | - | ATPase_2 |
| pfam | k141_262323 | k141_262323_19 | 18888 | 19238 | - | Glutaredoxin | ArsC |
| CAZyme | k141_262323 | k141_262323_20 | 19364 | 21673 | + | GH36 |
| CAZyme | k141_262323 | k141_262323_21 | 21572 | 22450 | - | CE1 |
Gene ID: k141_262323_15
Type: TC
Location: 13125 - 14261 (-)
Type: TC
Location: 13125 - 14261 (-)
Gene ID: k141_262323_16
Type: TC
Location: 14304 - 15632 (-)
Type: TC
Location: 14304 - 15632 (-)
Gene ID: k141_262323_17
Type: TC
Location: 15888 - 17234 (+)
Type: TC
Location: 15888 - 17234 (+)
Gene ID: k141_262323_18
Type: STP
Location: 17479 - 18720 (-)
Type: STP
Location: 17479 - 18720 (-)
Gene ID: k141_262323_19
Type: pfam
Location: 18888 - 19238 (-)
Type: pfam
Location: 18888 - 19238 (-)
Gene ID: k141_262323_20
Type: CAZyme
Location: 19364 - 21673 (+)
Type: CAZyme
Location: 19364 - 21673 (+)
Gene ID: k141_262323_21
Type: CAZyme
Location: 21572 - 22450 (-)
Type: CAZyme
Location: 21572 - 22450 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D bryantii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.