Cluster: CGMR091517_CGC35
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR091517
- CGC Family ID: CGCFAM_02645
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1478280 | k141_1478280_2 | 1264 | 2586 | + | GH3 |
| pfam | k141_1478280 | k141_1478280_3 | 2598 | 3452 | + | Methyltr_RsmB-F |
| TC | k141_1478280 | k141_1478280_4 | 3505 | 4740 | + | 8.A.59.4.2 |
Gene ID: k141_1478280_2
Type: CAZyme
Location: 1264 - 2586 (+)
Type: CAZyme
Location: 1264 - 2586 (+)
Gene ID: k141_1478280_3
Type: pfam
Location: 2598 - 3452 (+)
Type: pfam
Location: 2598 - 3452 (+)
Gene ID: k141_1478280_4
Type: TC
Location: 3505 - 4740 (+)
Type: TC
Location: 3505 - 4740 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D bryantii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.