Cluster: CGMR091517_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR091517
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_944627 | k141_944627_11 | 15347 | 17041 | - | 4.C.1.1.6 |
| pfam | k141_944627 | k141_944627_12 | 17164 | 17868 | + | DTW |
| CAZyme | k141_944627 | k141_944627_13 | 17865 | 19595 | - | GH3 |
| STP | k141_944627 | k141_944627_14 | 19595 | 20527 | - | Pyr_redox_2 |
| TC | k141_944627 | k141_944627_15 | 20580 | 21359 | - | 2.A.5.5.2 |
Gene ID: k141_944627_11
Type: TC
Location: 15347 - 17041 (-)
Type: TC
Location: 15347 - 17041 (-)
Gene ID: k141_944627_12
Type: pfam
Location: 17164 - 17868 (+)
Type: pfam
Location: 17164 - 17868 (+)
Gene ID: k141_944627_13
Type: CAZyme
Location: 17865 - 19595 (-)
Type: CAZyme
Location: 17865 - 19595 (-)
Gene ID: k141_944627_14
Type: STP
Location: 19595 - 20527 (-)
Type: STP
Location: 19595 - 20527 (-)
Gene ID: k141_944627_15
Type: TC
Location: 20580 - 21359 (-)
Type: TC
Location: 20580 - 21359 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D bryantii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.