Cluster: CGMR091517_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR091517
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_944627 | k141_944627_1 | 147 | 2630 | - | GH94 |
| pfam | k141_944627 | k141_944627_2 | 2782 | 3609 | - | PDDEXK_2 |
| TC | k141_944627 | k141_944627_3 | 3903 | 5222 | + | 9.B.1.1.3 |
| TF | k141_944627 | k141_944627_4 | 5232 | 6257 | + | LacI |
| TC | k141_944627 | k141_944627_5 | 6265 | 8172 | - | 3.A.1.120.6 |
Gene ID: k141_944627_1
Type: CAZyme
Location: 147 - 2630 (-)
Type: CAZyme
Location: 147 - 2630 (-)
Gene ID: k141_944627_2
Type: pfam
Location: 2782 - 3609 (-)
Type: pfam
Location: 2782 - 3609 (-)
Gene ID: k141_944627_3
Type: TC
Location: 3903 - 5222 (+)
Type: TC
Location: 3903 - 5222 (+)
Gene ID: k141_944627_4
Type: TF
Location: 5232 - 6257 (+)
Type: TF
Location: 5232 - 6257 (+)
Gene ID: k141_944627_5
Type: TC
Location: 6265 - 8172 (-)
Type: TC
Location: 6265 - 8172 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D bryantii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.