Cluster: CGMR091517_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR091517
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_182682 | k141_182682_15 | 32292 | 32879 | + | 2.A.107.1.2 |
| TF | k141_182682 | k141_182682_16 | 32887 | 33432 | + | HTH_AraC |
| CAZyme | k141_182682 | k141_182682_17 | 33426 | 34982 | - | GH13_44 |
| TC | k141_182682 | k141_182682_18 | 35004 | 35930 | - | 9.B.115.1.1 |
Gene ID: k141_182682_15
Type: TC
Location: 32292 - 32879 (+)
Type: TC
Location: 32292 - 32879 (+)
Gene ID: k141_182682_16
Type: TF
Location: 32887 - 33432 (+)
Type: TF
Location: 32887 - 33432 (+)
Gene ID: k141_182682_17
Type: CAZyme
Location: 33426 - 34982 (-)
Type: CAZyme
Location: 33426 - 34982 (-)
Gene ID: k141_182682_18
Type: TC
Location: 35004 - 35930 (-)
Type: TC
Location: 35004 - 35930 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D bryantii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.