Cluster: CGMR091517_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR091517
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_182682 | k141_182682_5 | 20769 | 22124 | + | 3.A.1.1.45 |
| TC | k141_182682 | k141_182682_6 | 22149 | 22994 | + | 3.A.1.1.45 |
| TC | k141_182682 | k141_182682_7 | 23025 | 23864 | + | 3.A.1.1.45 |
| CAZyme | k141_182682 | k141_182682_8 | 23887 | 25392 | + | GH77 |
| CAZyme | k141_182682 | k141_182682_9 | 25376 | 27370 | - | CE20 | CE20 |
| CAZyme | k141_182682 | k141_182682_10 | 27363 | 28967 | - | CBM91 | GH43_12 |
| TC | k141_182682 | k141_182682_11 | 29054 | 29752 | - | 1.A.14.2.2 |
Gene ID: k141_182682_5
Type: TC
Location: 20769 - 22124 (+)
Type: TC
Location: 20769 - 22124 (+)
Gene ID: k141_182682_6
Type: TC
Location: 22149 - 22994 (+)
Type: TC
Location: 22149 - 22994 (+)
Gene ID: k141_182682_7
Type: TC
Location: 23025 - 23864 (+)
Type: TC
Location: 23025 - 23864 (+)
Gene ID: k141_182682_8
Type: CAZyme
Location: 23887 - 25392 (+)
Type: CAZyme
Location: 23887 - 25392 (+)
Gene ID: k141_182682_9
Type: CAZyme
Location: 25376 - 27370 (-)
Type: CAZyme
Location: 25376 - 27370 (-)
Gene ID: k141_182682_10
Type: CAZyme
Location: 27363 - 28967 (-)
Type: CAZyme
Location: 27363 - 28967 (-)
Gene ID: k141_182682_11
Type: TC
Location: 29054 - 29752 (-)
Type: TC
Location: 29054 - 29752 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D bryantii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.