Cluster: CGMR091517_CGC26
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR091517
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_971474 | k141_971474_9 | 9745 | 11820 | - | 3.A.1.132.3 |
| TC | k141_971474 | k141_971474_10 | 11828 | 12559 | - | 3.A.1.132.1 |
| TC | k141_971474 | k141_971474_11 | 12549 | 13514 | - | 3.A.1.132.1 |
| TC | k141_971474 | k141_971474_12 | 13820 | 14881 | + | 9.A.23.1.1 |
| NULL(UNKNOWN) | k141_971474 | k141_971474_13 | 15091 | 16113 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_971474 | k141_971474_14 | 16329 | 17606 | + | Cys_Met_Meta_PP |
| CAZyme | k141_971474 | k141_971474_15 | 17773 | 19221 | + | GH63 |
Gene ID: k141_971474_9
Type: TC
Location: 9745 - 11820 (-)
Type: TC
Location: 9745 - 11820 (-)
Gene ID: k141_971474_10
Type: TC
Location: 11828 - 12559 (-)
Type: TC
Location: 11828 - 12559 (-)
Gene ID: k141_971474_11
Type: TC
Location: 12549 - 13514 (-)
Type: TC
Location: 12549 - 13514 (-)
Gene ID: k141_971474_12
Type: TC
Location: 13820 - 14881 (+)
Type: TC
Location: 13820 - 14881 (+)
Gene ID: k141_971474_13
Type:
Location: 15091 - 16113 (-)
Type:
Location: 15091 - 16113 (-)
Gene ID: k141_971474_14
Type: pfam
Location: 16329 - 17606 (+)
Type: pfam
Location: 16329 - 17606 (+)
Gene ID: k141_971474_15
Type: CAZyme
Location: 17773 - 19221 (+)
Type: CAZyme
Location: 17773 - 19221 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D bryantii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.