Cluster: CGMR091517_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR091517
- CGC Family ID: CGCFAM_03915
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_666921 | k141_666921_13 | 10681 | 11289 | - | GH73 |
| pfam | k141_666921 | k141_666921_14 | 11390 | 12046 | + | RadC | UPF0758_N |
| pfam | k141_666921 | k141_666921_15 | 12103 | 13632 | + | PEGA |
| TC | k141_666921 | k141_666921_16 | 13650 | 14852 | + | 9.B.160.1.10 |
Gene ID: k141_666921_13
Type: CAZyme
Location: 10681 - 11289 (-)
Type: CAZyme
Location: 10681 - 11289 (-)
Gene ID: k141_666921_14
Type: pfam
Location: 11390 - 12046 (+)
Type: pfam
Location: 11390 - 12046 (+)
Gene ID: k141_666921_15
Type: pfam
Location: 12103 - 13632 (+)
Type: pfam
Location: 12103 - 13632 (+)
Gene ID: k141_666921_16
Type: TC
Location: 13650 - 14852 (+)
Type: TC
Location: 13650 - 14852 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D bryantii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.