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Cluster: CGMR091517_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_1550832 k141_1550832_8 4856 7279 - GH95
TF k141_1550832 k141_1550832_9 7289 7603 - Trp_repressor
pfam k141_1550832 k141_1550832_10 7653 8120 - C_GCAxxG_C_C
TC k141_1550832 k141_1550832_11 8124 8948 - 3.A.1.132.3
pfam k141_1550832 k141_1550832_12 9024 10154 - MMR_HSR1 | YchF-GTPase_C
TC k141_1550832 k141_1550832_13 10167 11510 - 8.A.59.4.2
pfam k141_1550832 k141_1550832_14 11555 12502 - GTP_EFTU | MMR_HSR1 | FeoB_N | KH_2
CAZyme k141_1550832 k141_1550832_15 12587 14701 + GH13_11
CAZyme k141_1550832 k141_1550832_16 14725 17172 + GT35
Gene ID: k141_1550832_8
Type: CAZyme
Location: 4856 - 7279 (-)
Gene ID: k141_1550832_9
Type: TF
Location: 7289 - 7603 (-)
Gene ID: k141_1550832_10
Type: pfam
Location: 7653 - 8120 (-)
Gene ID: k141_1550832_11
Type: TC
Location: 8124 - 8948 (-)
Gene ID: k141_1550832_12
Type: pfam
Location: 9024 - 10154 (-)
Gene ID: k141_1550832_13
Type: TC
Location: 10167 - 11510 (-)
Gene ID: k141_1550832_14
Type: pfam
Location: 11555 - 12502 (-)
Gene ID: k141_1550832_15
Type: CAZyme
Location: 12587 - 14701 (+)
Gene ID: k141_1550832_16
Type: CAZyme
Location: 14725 - 17172 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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