Cluster: CGMR091517_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR091517
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1837388 | k141_1837388_6 | 5256 | 6512 | - | GH5_4 |
| CAZyme | k141_1837388 | k141_1837388_7 | 6565 | 7731 | - | GH5_4 |
| TC | k141_1837388 | k141_1837388_8 | 7847 | 9127 | + | 8.A.59.4.2 |
| pfam | k141_1837388 | k141_1837388_9 | 9145 | 9483 | - | PqqD |
| TC | k141_1837388 | k141_1837388_10 | 9485 | 11389 | - | 2.A.67.4.2 |
Gene ID: k141_1837388_6
Type: CAZyme
Location: 5256 - 6512 (-)
Type: CAZyme
Location: 5256 - 6512 (-)
Gene ID: k141_1837388_7
Type: CAZyme
Location: 6565 - 7731 (-)
Type: CAZyme
Location: 6565 - 7731 (-)
Gene ID: k141_1837388_8
Type: TC
Location: 7847 - 9127 (+)
Type: TC
Location: 7847 - 9127 (+)
Gene ID: k141_1837388_9
Type: pfam
Location: 9145 - 9483 (-)
Type: pfam
Location: 9145 - 9483 (-)
Gene ID: k141_1837388_10
Type: TC
Location: 9485 - 11389 (-)
Type: TC
Location: 9485 - 11389 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D bryantii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.