Cluster: CGMR091517_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR091517
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_872017 | k141_872017_1 | 6 | 833 | - | 3.A.1.1.34 |
| TC | k141_872017 | k141_872017_2 | 830 | 1741 | - | 3.A.1.1.11 |
| TC | k141_872017 | k141_872017_3 | 1734 | 2768 | - | 3.A.1.1.38 |
| NULL(UNKNOWN) | k141_872017 | k141_872017_4 | 2897 | 3553 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_872017 | k141_872017_5 | 3689 | 4882 | + | GH10 |
Gene ID: k141_872017_1
Type: TC
Location: 6 - 833 (-)
Type: TC
Location: 6 - 833 (-)
Gene ID: k141_872017_2
Type: TC
Location: 830 - 1741 (-)
Type: TC
Location: 830 - 1741 (-)
Gene ID: k141_872017_3
Type: TC
Location: 1734 - 2768 (-)
Type: TC
Location: 1734 - 2768 (-)
Gene ID: k141_872017_4
Type:
Location: 2897 - 3553 (+)
Type:
Location: 2897 - 3553 (+)
Gene ID: k141_872017_5
Type: CAZyme
Location: 3689 - 4882 (+)
Type: CAZyme
Location: 3689 - 4882 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D bryantii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.