Cluster: CGMR091158_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR091158
- CGC Family ID: CGCFAM_00889
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_22946 | k141_22946_25 | 27979 | 29079 | + | GT4 |
| CAZyme | k141_22946 | k141_22946_26 | 29072 | 29902 | + | CE4 |
| pfam | k141_22946 | k141_22946_27 | 29919 | 30176 | - | CxxCxxCC |
| pfam | k141_22946 | k141_22946_28 | 30176 | 30940 | - | DUF218 |
| CAZyme | k141_22946 | k141_22946_29 | 30937 | 31860 | - | GT9 |
| TC | k141_22946 | k141_22946_30 | 32019 | 33812 | + | 3.A.1.106.1 |
Gene ID: k141_22946_25
Type: CAZyme
Location: 27979 - 29079 (+)
Type: CAZyme
Location: 27979 - 29079 (+)
Gene ID: k141_22946_26
Type: CAZyme
Location: 29072 - 29902 (+)
Type: CAZyme
Location: 29072 - 29902 (+)
Gene ID: k141_22946_27
Type: pfam
Location: 29919 - 30176 (-)
Type: pfam
Location: 29919 - 30176 (-)
Gene ID: k141_22946_28
Type: pfam
Location: 30176 - 30940 (-)
Type: pfam
Location: 30176 - 30940 (-)
Gene ID: k141_22946_29
Type: CAZyme
Location: 30937 - 31860 (-)
Type: CAZyme
Location: 30937 - 31860 (-)
Gene ID: k141_22946_30
Type: TC
Location: 32019 - 33812 (+)
Type: TC
Location: 32019 - 33812 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Paenalcaligenes
Species
Paenalcaligenes suwonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.