Cluster: CGMR091158_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR091158
- CGC Family ID: CGCFAM_03870
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_29164 | k141_29164_7 | 4958 | 7162 | + | 3.A.1.5.18 |
| TC | k141_29164 | k141_29164_8 | 7159 | 8136 | + | 3.A.1.5.20 |
| TC | k141_29164 | k141_29164_9 | 8171 | 9670 | + | 3.A.1.5.34 |
| TC | k141_29164 | k141_29164_10 | 9667 | 11340 | + | 3.A.1.5.24 |
| pfam | k141_29164 | k141_29164_11 | 11414 | 11893 | + | DUF1178 |
| pfam | k141_29164 | k141_29164_12 | 11974 | 12528 | - | EFP | EFP_N | Elong-fact-P_C |
| CAZyme | k141_29164 | k141_29164_13 | 12600 | 13709 | - | GT104 |
Gene ID: k141_29164_7
Type: TC
Location: 4958 - 7162 (+)
Type: TC
Location: 4958 - 7162 (+)
Gene ID: k141_29164_8
Type: TC
Location: 7159 - 8136 (+)
Type: TC
Location: 7159 - 8136 (+)
Gene ID: k141_29164_9
Type: TC
Location: 8171 - 9670 (+)
Type: TC
Location: 8171 - 9670 (+)
Gene ID: k141_29164_10
Type: TC
Location: 9667 - 11340 (+)
Type: TC
Location: 9667 - 11340 (+)
Gene ID: k141_29164_11
Type: pfam
Location: 11414 - 11893 (+)
Type: pfam
Location: 11414 - 11893 (+)
Gene ID: k141_29164_12
Type: pfam
Location: 11974 - 12528 (-)
Type: pfam
Location: 11974 - 12528 (-)
Gene ID: k141_29164_13
Type: CAZyme
Location: 12600 - 13709 (-)
Type: CAZyme
Location: 12600 - 13709 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Paenalcaligenes
Species
Paenalcaligenes suwonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.