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Cluster: CGMR091115_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_10519 k141_10519_47 48011 49687 - 4.C.1.1.4
pfam k141_10519 k141_10519_48 49838 52057 - DNA_topoisoIV | DNA_gyraseA_C | DNA_gyraseA_C
TC k141_10519 k141_10519_49 52224 53543 - 2.A.1.82.4
TC k141_10519 k141_10519_50 53675 54319 - 1.A.62.2.3
pfam k141_10519 k141_10519_51 54381 54821 - SEC-C | YchJ_M-like
TC k141_10519 k141_10519_52 54923 56500 - 2.A.109.2.3
pfam k141_10519 k141_10519_53 56810 57430 + Lysine_decarbox | LDcluster4
NULL(UNKNOWN) k141_10519 k141_10519_54 57502 58467 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_10519 k141_10519_55 58956 60347 + 2.A.1.3.26
CAZyme k141_10519 k141_10519_56 60398 61204 + GH25
Gene ID: k141_10519_47
Type: TC
Location: 48011 - 49687 (-)
Gene ID: k141_10519_48
Type: pfam
Location: 49838 - 52057 (-)
Gene ID: k141_10519_49
Type: TC
Location: 52224 - 53543 (-)
Gene ID: k141_10519_50
Type: TC
Location: 53675 - 54319 (-)
Gene ID: k141_10519_51
Type: pfam
Location: 54381 - 54821 (-)
Gene ID: k141_10519_52
Type: TC
Location: 54923 - 56500 (-)
Gene ID: k141_10519_53
Type: pfam
Location: 56810 - 57430 (+)
Gene ID: k141_10519_54
Type:
Location: 57502 - 58467 (-)
Gene ID: k141_10519_55
Type: TC
Location: 58956 - 60347 (+)
Gene ID: k141_10519_56
Type: CAZyme
Location: 60398 - 61204 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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