Cluster: CGMR091115_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR091115
- CGC Family ID: CGCFAM_01775
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_12859 | k141_12859_1 | 1 | 531 | - | 1.B.14.4.2 |
| pfam | k141_12859 | k141_12859_2 | 602 | 1024 | - | DUF2946 |
| pfam | k141_12859 | k141_12859_3 | 1128 | 1658 | - | Pep_deformylase |
| CAZyme | k141_12859 | k141_12859_4 | 1779 | 2933 | + | CBM50 |
| TC | k141_12859 | k141_12859_5 | 3023 | 4162 | + | 3.A.11.1.3 |
Gene ID: k141_12859_1
Type: TC
Location: 1 - 531 (-)
Type: TC
Location: 1 - 531 (-)
Gene ID: k141_12859_2
Type: pfam
Location: 602 - 1024 (-)
Type: pfam
Location: 602 - 1024 (-)
Gene ID: k141_12859_3
Type: pfam
Location: 1128 - 1658 (-)
Type: pfam
Location: 1128 - 1658 (-)
Gene ID: k141_12859_4
Type: CAZyme
Location: 1779 - 2933 (+)
Type: CAZyme
Location: 1779 - 2933 (+)
Gene ID: k141_12859_5
Type: TC
Location: 3023 - 4162 (+)
Type: TC
Location: 3023 - 4162 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter lwoffii_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.