Cluster: CGMR090619_CGC18
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR090619
- CGC Family ID: CGCFAM_05738
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_13168 | k141_13168_20 | 17907 | 19451 | - | 2.A.22.4.3 |
| TC | k141_13168 | k141_13168_21 | 19521 | 20360 | - | 3.A.1.15.14 |
| TC | k141_13168 | k141_13168_22 | 20361 | 21116 | - | 3.A.1.15.1 |
| NULL(UNKNOWN) | k141_13168 | k141_13168_23 | 21116 | 22084 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_13168 | k141_13168_24 | 22081 | 23706 | - | 3.A.1.15.15 |
| NULL(UNKNOWN) | k141_13168 | k141_13168_25 | 23703 | 26099 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_13168 | k141_13168_26 | 26194 | 27216 | - | GT2 |
| TC | k141_13168 | k141_13168_27 | 27325 | 27555 | + | 4.A.1.1.5 |
| TC | k141_13168 | k141_13168_28 | 27552 | 28028 | + | 4.A.1.2.11 |
| CAZyme | k141_13168 | k141_13168_29 | 28035 | 30158 | - | GH77 |
| pfam | k141_13168 | k141_13168_30 | 30190 | 30486 | - | PTS_EIIB |
| pfam | k141_13168 | k141_13168_31 | 30627 | 31583 | + | Acyl_CoA_thio | 4HBT_3 | 4HBT_3C |
| TC | k141_13168 | k141_13168_32 | 31702 | 33384 | - | 3.A.1.120.6 |
Gene ID: k141_13168_20
Type: TC
Location: 17907 - 19451 (-)
Type: TC
Location: 17907 - 19451 (-)
Gene ID: k141_13168_21
Type: TC
Location: 19521 - 20360 (-)
Type: TC
Location: 19521 - 20360 (-)
Gene ID: k141_13168_22
Type: TC
Location: 20361 - 21116 (-)
Type: TC
Location: 20361 - 21116 (-)
Gene ID: k141_13168_23
Type:
Location: 21116 - 22084 (-)
Type:
Location: 21116 - 22084 (-)
Gene ID: k141_13168_24
Type: TC
Location: 22081 - 23706 (-)
Type: TC
Location: 22081 - 23706 (-)
Gene ID: k141_13168_25
Type:
Location: 23703 - 26099 (-)
Type:
Location: 23703 - 26099 (-)
Gene ID: k141_13168_26
Type: CAZyme
Location: 26194 - 27216 (-)
Type: CAZyme
Location: 26194 - 27216 (-)
Gene ID: k141_13168_27
Type: TC
Location: 27325 - 27555 (+)
Type: TC
Location: 27325 - 27555 (+)
Gene ID: k141_13168_28
Type: TC
Location: 27552 - 28028 (+)
Type: TC
Location: 27552 - 28028 (+)
Gene ID: k141_13168_29
Type: CAZyme
Location: 28035 - 30158 (-)
Type: CAZyme
Location: 28035 - 30158 (-)
Gene ID: k141_13168_30
Type: pfam
Location: 30190 - 30486 (-)
Type: pfam
Location: 30190 - 30486 (-)
Gene ID: k141_13168_31
Type: pfam
Location: 30627 - 31583 (+)
Type: pfam
Location: 30627 - 31583 (+)
Gene ID: k141_13168_32
Type: TC
Location: 31702 - 33384 (-)
Type: TC
Location: 31702 - 33384 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp900554605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.