Cluster: CGMR090544_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR090544
- CGC Family ID: CGCFAM_09116
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1462 | k141_1462_7 | 4495 | 5814 | + | 2.A.22.5.3 |
| TC | k141_1462 | k141_1462_8 | 5832 | 7190 | + | 2.A.22.5.3 |
| pfam | k141_1462 | k141_1462_9 | 7210 | 8109 | + | HHH_3 | HHH_3 | HHH_3 |
| CAZyme | k141_1462 | k141_1462_10 | 8484 | 10679 | + | GH163 |
| pfam | k141_1462 | k141_1462_11 | 10813 | 12120 | - | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| CAZyme | k141_1462 | k141_1462_12 | 12406 | 14697 | + | GH3 |
Gene ID: k141_1462_7
Type: TC
Location: 4495 - 5814 (+)
Type: TC
Location: 4495 - 5814 (+)
Gene ID: k141_1462_8
Type: TC
Location: 5832 - 7190 (+)
Type: TC
Location: 5832 - 7190 (+)
Gene ID: k141_1462_9
Type: pfam
Location: 7210 - 8109 (+)
Type: pfam
Location: 7210 - 8109 (+)
Gene ID: k141_1462_10
Type: CAZyme
Location: 8484 - 10679 (+)
Type: CAZyme
Location: 8484 - 10679 (+)
Gene ID: k141_1462_11
Type: pfam
Location: 10813 - 12120 (-)
Type: pfam
Location: 10813 - 12120 (-)
Gene ID: k141_1462_12
Type: CAZyme
Location: 12406 - 14697 (+)
Type: CAZyme
Location: 12406 - 14697 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp004554665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.