Cluster: CGMR090544_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR090544
- CGC Family ID: CGCFAM_05810
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_258846 | k141_258846_3 | 2621 | 3313 | - | 3.A.1.13.2 |
| CAZyme | k141_258846 | k141_258846_4 | 3444 | 5675 | - | GH92 |
| pfam | k141_258846 | k141_258846_5 | 5779 | 8043 | - | OMP_b-brl_3 |
| pfam | k141_258846 | k141_258846_6 | 8517 | 11006 | - | TonB_dep_Rec_b-barrel | Plug | CarboxypepD_reg | CarbopepD_reg_2 | OMP_b-brl_3 |
| CAZyme | k141_258846 | k141_258846_7 | 11275 | 12921 | - | GH20 |
| CAZyme | k141_258846 | k141_258846_8 | 12960 | 14054 | - | CE2 |
Gene ID: k141_258846_3
Type: TC
Location: 2621 - 3313 (-)
Type: TC
Location: 2621 - 3313 (-)
Gene ID: k141_258846_4
Type: CAZyme
Location: 3444 - 5675 (-)
Type: CAZyme
Location: 3444 - 5675 (-)
Gene ID: k141_258846_5
Type: pfam
Location: 5779 - 8043 (-)
Type: pfam
Location: 5779 - 8043 (-)
Gene ID: k141_258846_6
Type: pfam
Location: 8517 - 11006 (-)
Type: pfam
Location: 8517 - 11006 (-)
Gene ID: k141_258846_7
Type: CAZyme
Location: 11275 - 12921 (-)
Type: CAZyme
Location: 11275 - 12921 (-)
Gene ID: k141_258846_8
Type: CAZyme
Location: 12960 - 14054 (-)
Type: CAZyme
Location: 12960 - 14054 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp004554665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.