Cluster: CGMR090538_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR090538
- CGC Family ID: CGCFAM_01668
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_28224 | k141_28224_30 | 24398 | 25255 | + | CE4 |
| pfam | k141_28224 | k141_28224_31 | 25255 | 26088 | + | Polysacc_deac_1 |
| STP | k141_28224 | k141_28224_32 | 26109 | 26930 | + | SBP_bac_3 |
| TC | k141_28224 | k141_28224_33 | 26943 | 27599 | + | 3.A.1.3.15 |
| TC | k141_28224 | k141_28224_34 | 27592 | 28317 | + | 3.A.1.3.15 |
Gene ID: k141_28224_30
Type: CAZyme
Location: 24398 - 25255 (+)
Type: CAZyme
Location: 24398 - 25255 (+)
Gene ID: k141_28224_31
Type: pfam
Location: 25255 - 26088 (+)
Type: pfam
Location: 25255 - 26088 (+)
Gene ID: k141_28224_32
Type: STP
Location: 26109 - 26930 (+)
Type: STP
Location: 26109 - 26930 (+)
Gene ID: k141_28224_33
Type: TC
Location: 26943 - 27599 (+)
Type: TC
Location: 26943 - 27599 (+)
Gene ID: k141_28224_34
Type: TC
Location: 27592 - 28317 (+)
Type: TC
Location: 27592 - 28317 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.