Cluster: CGMR090538_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR090538
- CGC Family ID: CGCFAM_00465
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_47748 | k141_47748_31 | 42917 | 44035 | + | 2.A.6.2.39 |
| TC | k141_47748 | k141_47748_32 | 44038 | 47121 | + | 2.A.6.3.1 |
| pfam | k141_47748 | k141_47748_33 | 47385 | 48344 | + | RNase_HII |
| pfam | k141_47748 | k141_47748_34 | 48518 | 49366 | + | YdjC |
| TC | k141_47748 | k141_47748_35 | 49456 | 50481 | + | 4.D.2.1.4 |
| pfam | k141_47748 | k141_47748_36 | 50540 | 51469 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| CAZyme | k141_47748 | k141_47748_37 | 51469 | 53028 | + | GT83 |
Gene ID: k141_47748_31
Type: TC
Location: 42917 - 44035 (+)
Type: TC
Location: 42917 - 44035 (+)
Gene ID: k141_47748_32
Type: TC
Location: 44038 - 47121 (+)
Type: TC
Location: 44038 - 47121 (+)
Gene ID: k141_47748_33
Type: pfam
Location: 47385 - 48344 (+)
Type: pfam
Location: 47385 - 48344 (+)
Gene ID: k141_47748_34
Type: pfam
Location: 48518 - 49366 (+)
Type: pfam
Location: 48518 - 49366 (+)
Gene ID: k141_47748_35
Type: TC
Location: 49456 - 50481 (+)
Type: TC
Location: 49456 - 50481 (+)
Gene ID: k141_47748_36
Type: pfam
Location: 50540 - 51469 (+)
Type: pfam
Location: 50540 - 51469 (+)
Gene ID: k141_47748_37
Type: CAZyme
Location: 51469 - 53028 (+)
Type: CAZyme
Location: 51469 - 53028 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.