Cluster: CGMR090538_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR090538
- CGC Family ID: CGCFAM_00029
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_42296 | k141_42296_34 | 33920 | 35896 | + | 9.B.18.2.1 |
| pfam | k141_42296 | k141_42296_35 | 36013 | 37296 | + | DegT_DnrJ_EryC1 |
| TC | k141_42296 | k141_42296_36 | 37307 | 37990 | + | 9.B.18.1.3 |
| CAZyme | k141_42296 | k141_42296_37 | 37991 | 38797 | + | GT2 |
| CAZyme | k141_42296 | k141_42296_38 | 38830 | 39918 | + | GT4 |
| pfam | k141_42296 | k141_42296_39 | 39937 | 40851 | + | ATPgrasp_TupA |
| CAZyme | k141_42296 | k141_42296_40 | 40884 | 41975 | + | GT4 |
Gene ID: k141_42296_34
Type: TC
Location: 33920 - 35896 (+)
Type: TC
Location: 33920 - 35896 (+)
Gene ID: k141_42296_35
Type: pfam
Location: 36013 - 37296 (+)
Type: pfam
Location: 36013 - 37296 (+)
Gene ID: k141_42296_36
Type: TC
Location: 37307 - 37990 (+)
Type: TC
Location: 37307 - 37990 (+)
Gene ID: k141_42296_37
Type: CAZyme
Location: 37991 - 38797 (+)
Type: CAZyme
Location: 37991 - 38797 (+)
Gene ID: k141_42296_38
Type: CAZyme
Location: 38830 - 39918 (+)
Type: CAZyme
Location: 38830 - 39918 (+)
Gene ID: k141_42296_39
Type: pfam
Location: 39937 - 40851 (+)
Type: pfam
Location: 39937 - 40851 (+)
Gene ID: k141_42296_40
Type: CAZyme
Location: 40884 - 41975 (+)
Type: CAZyme
Location: 40884 - 41975 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.