Cluster: CGMR090538_CGC13
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR090538
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_75226 | k141_75226_25 | 22992 | 24029 | + | 2.A.56.1.8 |
| pfam | k141_75226 | k141_75226_26 | 24132 | 24602 | + | DctQ |
| TC | k141_75226 | k141_75226_27 | 24602 | 25879 | + | 2.A.56.1.8 |
| pfam | k141_75226 | k141_75226_28 | 25895 | 27397 | + | FGGY_N | FGGY_C |
| TC | k141_75226 | k141_75226_29 | 27629 | 28567 | + | 2.A.4.7.9 |
| pfam | k141_75226 | k141_75226_30 | 28630 | 29067 | - | C_GCAxxG_C_C |
| CAZyme | k141_75226 | k141_75226_31 | 29107 | 30510 | - | AA4 |
| TC | k141_75226 | k141_75226_32 | 30743 | 30952 | + | 2.A.98.1.4 |
Gene ID: k141_75226_25
Type: TC
Location: 22992 - 24029 (+)
Type: TC
Location: 22992 - 24029 (+)
Gene ID: k141_75226_26
Type: pfam
Location: 24132 - 24602 (+)
Type: pfam
Location: 24132 - 24602 (+)
Gene ID: k141_75226_27
Type: TC
Location: 24602 - 25879 (+)
Type: TC
Location: 24602 - 25879 (+)
Gene ID: k141_75226_28
Type: pfam
Location: 25895 - 27397 (+)
Type: pfam
Location: 25895 - 27397 (+)
Gene ID: k141_75226_29
Type: TC
Location: 27629 - 28567 (+)
Type: TC
Location: 27629 - 28567 (+)
Gene ID: k141_75226_30
Type: pfam
Location: 28630 - 29067 (-)
Type: pfam
Location: 28630 - 29067 (-)
Gene ID: k141_75226_31
Type: CAZyme
Location: 29107 - 30510 (-)
Type: CAZyme
Location: 29107 - 30510 (-)
Gene ID: k141_75226_32
Type: TC
Location: 30743 - 30952 (+)
Type: TC
Location: 30743 - 30952 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.