Cluster: CGMR090425_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR090425
- CGC Family ID: CGCFAM_01702
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_75235 | k141_75235_21 | 19659 | 20453 | + | 2.A.64.2.2 |
| pfam | k141_75235 | k141_75235_22 | 20560 | 23382 | + | DEAD | Helicase_C | ResIII | DSHCT | MTR4-like_stalk | DEXQc_Suv3 |
| peptidase | k141_75235 | k141_75235_23 | 23420 | 25066 | + | M38.UNW |
| CAZyme | k141_75235 | k141_75235_24 | 25563 | 26297 | + | GT2 |
| pfam | k141_75235 | k141_75235_25 | 26400 | 26744 | - | RbpA |
| TC | k141_75235 | k141_75235_26 | 26964 | 27890 | - | 8.A.21.2.2 |
Gene ID: k141_75235_21
Type: TC
Location: 19659 - 20453 (+)
Type: TC
Location: 19659 - 20453 (+)
Gene ID: k141_75235_22
Type: pfam
Location: 20560 - 23382 (+)
Type: pfam
Location: 20560 - 23382 (+)
Gene ID: k141_75235_23
Type: peptidase
Location: 23420 - 25066 (+)
Type: peptidase
Location: 23420 - 25066 (+)
Gene ID: k141_75235_24
Type: CAZyme
Location: 25563 - 26297 (+)
Type: CAZyme
Location: 25563 - 26297 (+)
Gene ID: k141_75235_25
Type: pfam
Location: 26400 - 26744 (-)
Type: pfam
Location: 26400 - 26744 (-)
Gene ID: k141_75235_26
Type: TC
Location: 26964 - 27890 (-)
Type: TC
Location: 26964 - 27890 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Arthrobacter_E
Species
Arthrobacter_E sp029690065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.