Cluster: CGMR090425_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR090425
- CGC Family ID: CGCFAM_05227
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_86864 | k141_86864_1 | 3 | 665 | - | 3.A.1.1.25 |
| TC | k141_86864 | k141_86864_2 | 662 | 1612 | - | 3.A.1.1.18 |
| STP | k141_86864 | k141_86864_3 | 1673 | 2983 | - | SBP_bac_1 |
| TF | k141_86864 | k141_86864_4 | 3088 | 4119 | - | LacI |
| CAZyme | k141_86864 | k141_86864_5 | 4299 | 6632 | - | GH65 |
Gene ID: k141_86864_1
Type: TC
Location: 3 - 665 (-)
Type: TC
Location: 3 - 665 (-)
Gene ID: k141_86864_2
Type: TC
Location: 662 - 1612 (-)
Type: TC
Location: 662 - 1612 (-)
Gene ID: k141_86864_3
Type: STP
Location: 1673 - 2983 (-)
Type: STP
Location: 1673 - 2983 (-)
Gene ID: k141_86864_4
Type: TF
Location: 3088 - 4119 (-)
Type: TF
Location: 3088 - 4119 (-)
Gene ID: k141_86864_5
Type: CAZyme
Location: 4299 - 6632 (-)
Type: CAZyme
Location: 4299 - 6632 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Arthrobacter_E
Species
Arthrobacter_E sp029690065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.