Cluster: CGMR090348_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR090348
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_19437 | k141_19437_8 | 5412 | 6557 | + | CE9 |
| TC | k141_19437 | k141_19437_9 | 7123 | 9870 | + | 3.A.3.4.1 |
| pfam | k141_19437 | k141_19437_10 | 10004 | 10837 | - | PocR |
| TF | k141_19437 | k141_19437_11 | 10853 | 11527 | - | Trans_reg_C |
| TC | k141_19437 | k141_19437_12 | 11502 | 13418 | - | 2.A.21.9.2 |
Gene ID: k141_19437_8
Type: CAZyme
Location: 5412 - 6557 (+)
Type: CAZyme
Location: 5412 - 6557 (+)
Gene ID: k141_19437_9
Type: TC
Location: 7123 - 9870 (+)
Type: TC
Location: 7123 - 9870 (+)
Gene ID: k141_19437_10
Type: pfam
Location: 10004 - 10837 (-)
Type: pfam
Location: 10004 - 10837 (-)
Gene ID: k141_19437_11
Type: TF
Location: 10853 - 11527 (-)
Type: TF
Location: 10853 - 11527 (-)
Gene ID: k141_19437_12
Type: TC
Location: 11502 - 13418 (-)
Type: TC
Location: 11502 - 13418 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A varium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.