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Cluster: CGMR090348_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_149926 k141_149926_1 72 2225 + 9.B.18.2.1
TC k141_149926 k141_149926_2 2245 2925 + 9.B.18.1.2
pfam k141_149926 k141_149926_3 2925 3815 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme k141_149926 k141_149926_4 3812 5026 + GT4
TC k141_149926 k141_149926_5 5040 6065 + 9.B.18.2.1
pfam k141_149926 k141_149926_6 6068 7174 + Epimerase | Polysacc_synt_2 | NAD_binding_4 | Polysacc_synt_C
pfam k141_149926 k141_149926_7 7178 8302 + Epimerase_2
CAZyme k141_149926 k141_149926_8 8304 9413 + GT4
Gene ID: k141_149926_1
Type: TC
Location: 72 - 2225 (+)
Gene ID: k141_149926_2
Type: TC
Location: 2245 - 2925 (+)
Gene ID: k141_149926_3
Type: pfam
Location: 2925 - 3815 (+)
Gene ID: k141_149926_4
Type: CAZyme
Location: 3812 - 5026 (+)
Gene ID: k141_149926_5
Type: TC
Location: 5040 - 6065 (+)
Gene ID: k141_149926_6
Type: pfam
Location: 6068 - 7174 (+)
Gene ID: k141_149926_7
Type: pfam
Location: 7178 - 8302 (+)
Gene ID: k141_149926_8
Type: CAZyme
Location: 8304 - 9413 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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