Cluster: CGMR090348_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR090348
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_95218 | k141_95218_3 | 1476 | 3341 | + | 4.A.1.2.11 |
| CAZyme | k141_95218 | k141_95218_4 | 3425 | 4894 | + | GH1 |
| NULL(UNKNOWN) | k141_95218 | k141_95218_5 | 4953 | 5051 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_95218 | k141_95218_6 | 5486 | 7489 | + | 2.A.21.9.1 |
| TF | k141_95218 | k141_95218_7 | 7503 | 8876 | + | HTH_8 |
| TC | k141_95218 | k141_95218_8 | 9152 | 10603 | + | 2.A.35.1.1 |
Gene ID: k141_95218_3
Type: TC
Location: 1476 - 3341 (+)
Type: TC
Location: 1476 - 3341 (+)
Gene ID: k141_95218_4
Type: CAZyme
Location: 3425 - 4894 (+)
Type: CAZyme
Location: 3425 - 4894 (+)
Gene ID: k141_95218_5
Type:
Location: 4953 - 5051 (-)
Type:
Location: 4953 - 5051 (-)
Gene ID: k141_95218_6
Type: TC
Location: 5486 - 7489 (+)
Type: TC
Location: 5486 - 7489 (+)
Gene ID: k141_95218_7
Type: TF
Location: 7503 - 8876 (+)
Type: TF
Location: 7503 - 8876 (+)
Gene ID: k141_95218_8
Type: TC
Location: 9152 - 10603 (+)
Type: TC
Location: 9152 - 10603 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A varium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.