Cluster: CGMR090348_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR090348
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_108191 | k141_108191_26 | 26361 | 27398 | - | GH179 |
| pfam | k141_108191 | k141_108191_27 | 27408 | 28334 | - | AP_endonuc_2 |
| TC | k141_108191 | k141_108191_28 | 28360 | 29322 | - | 3.A.1.2.13 |
| TC | k141_108191 | k141_108191_29 | 29319 | 30815 | - | 3.A.1.2.6 |
| STP | k141_108191 | k141_108191_30 | 30881 | 31879 | - | Peripla_BP_1 |
| TF | k141_108191 | k141_108191_31 | 31918 | 32931 | - | LacI |
| TC | k141_108191 | k141_108191_32 | 33184 | 33888 | + | 3.A.16.1.3 |
Gene ID: k141_108191_26
Type: CAZyme
Location: 26361 - 27398 (-)
Type: CAZyme
Location: 26361 - 27398 (-)
Gene ID: k141_108191_27
Type: pfam
Location: 27408 - 28334 (-)
Type: pfam
Location: 27408 - 28334 (-)
Gene ID: k141_108191_28
Type: TC
Location: 28360 - 29322 (-)
Type: TC
Location: 28360 - 29322 (-)
Gene ID: k141_108191_29
Type: TC
Location: 29319 - 30815 (-)
Type: TC
Location: 29319 - 30815 (-)
Gene ID: k141_108191_30
Type: STP
Location: 30881 - 31879 (-)
Type: STP
Location: 30881 - 31879 (-)
Gene ID: k141_108191_31
Type: TF
Location: 31918 - 32931 (-)
Type: TF
Location: 31918 - 32931 (-)
Gene ID: k141_108191_32
Type: TC
Location: 33184 - 33888 (+)
Type: TC
Location: 33184 - 33888 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A varium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.