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Cluster: CGMR090244_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_11162 k141_11162_17 30036 31097 - 1.A.35.3.2
TC k141_11162 k141_11162_18 31135 32775 - 1.A.23.3.1
pfam k141_11162 k141_11162_19 33068 34912 + POR | POR_N
pfam k141_11162 k141_11162_20 34915 35931 + TPP_enzyme_C
CAZyme k141_11162 k141_11162_21 35986 38358 - GH92
TC k141_11162 k141_11162_22 38476 40629 + 2.A.37.2.5
Gene ID: k141_11162_17
Type: TC
Location: 30036 - 31097 (-)
Gene ID: k141_11162_18
Type: TC
Location: 31135 - 32775 (-)
Gene ID: k141_11162_19
Type: pfam
Location: 33068 - 34912 (+)
Gene ID: k141_11162_20
Type: pfam
Location: 34915 - 35931 (+)
Gene ID: k141_11162_21
Type: CAZyme
Location: 35986 - 38358 (-)
Gene ID: k141_11162_22
Type: TC
Location: 38476 - 40629 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_11162_19 vegan > omnivore 2.20847 0.02024

🧭 Explore Read Mapping of CGC

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