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Cluster: CGMR090244_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_136436 k141_136436_16 21458 22744 + GT4
pfam k141_136436 k141_136436_17 22758 23738 + C5-epim_C
peptidase k141_136436 k141_136436_18 23786 25714 + C44.UNW
CAZyme k141_136436 k141_136436_19 25726 26766 + GT2
pfam k141_136436 k141_136436_20 26775 27851 + Epimerase_2
CAZyme k141_136436 k141_136436_21 27833 28996 - GT4
NULL(UNKNOWN) k141_136436 k141_136436_22 29034 30485 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_136436 k141_136436_23 30547 32052 - Polysacc_synt | Polysacc_synt_3
CAZyme k141_136436 k141_136436_24 32069 33184 - GT4
TC k141_136436 k141_136436_25 33308 35782 + 9.B.144.1.4
Gene ID: k141_136436_16
Type: CAZyme
Location: 21458 - 22744 (+)
Gene ID: k141_136436_17
Type: pfam
Location: 22758 - 23738 (+)
Gene ID: k141_136436_18
Type: peptidase
Location: 23786 - 25714 (+)
Gene ID: k141_136436_19
Type: CAZyme
Location: 25726 - 26766 (+)
Gene ID: k141_136436_20
Type: pfam
Location: 26775 - 27851 (+)
Gene ID: k141_136436_21
Type: CAZyme
Location: 27833 - 28996 (-)
Gene ID: k141_136436_22
Type:
Location: 29034 - 30485 (-)
Gene ID: k141_136436_23
Type: pfam
Location: 30547 - 32052 (-)
Gene ID: k141_136436_24
Type: CAZyme
Location: 32069 - 33184 (-)
Gene ID: k141_136436_25
Type: TC
Location: 33308 - 35782 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_136436_17 vegetarian > omnivore 1.02550 0.01875
k141_136436_17 vegetarian > vegan 1.03325 0.00694

🧭 Explore Read Mapping of CGC

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