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Cluster: CGMR090244_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_51804 k141_51804_22 27332 28351 - 3.A.1.13.2
TC k141_51804 k141_51804_23 28403 29449 - 3.A.1.13.2
TC k141_51804 k141_51804_24 29454 30638 - 3.A.1.13.2
pfam k141_51804 k141_51804_25 30909 31604 + TP_methylase
CAZyme k141_51804 k141_51804_26 31601 33709 - GH2
CAZyme k141_51804 k141_51804_27 33724 35151 - GH29
NULL(UNKNOWN) k141_51804 k141_51804_28 35227 36117 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_51804 k141_51804_29 36114 37697 - SusD_RagB | SusD-like_3
TC k141_51804 k141_51804_30 37710 41312 - 1.B.14.6.1
Gene ID: k141_51804_22
Type: TC
Location: 27332 - 28351 (-)
Gene ID: k141_51804_23
Type: TC
Location: 28403 - 29449 (-)
Gene ID: k141_51804_24
Type: TC
Location: 29454 - 30638 (-)
Gene ID: k141_51804_25
Type: pfam
Location: 30909 - 31604 (+)
Gene ID: k141_51804_26
Type: CAZyme
Location: 31601 - 33709 (-)
Gene ID: k141_51804_27
Type: CAZyme
Location: 33724 - 35151 (-)
Gene ID: k141_51804_28
Type:
Location: 35227 - 36117 (-)
Gene ID: k141_51804_29
Type: pfam
Location: 36114 - 37697 (-)
Gene ID: k141_51804_30
Type: TC
Location: 37710 - 41312 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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