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Cluster: CGMR090244_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_132363 k141_132363_70 87360 88289 + GT2
TC k141_132363 k141_132363_71 88294 89733 + 2.A.66.2.23
CAZyme k141_132363 k141_132363_72 89730 90893 + GT4
pfam k141_132363 k141_132363_73 90926 92017 + Exo_endo_phos
pfam k141_132363 k141_132363_74 92025 93101 + Exo_endo_phos
CAZyme k141_132363 k141_132363_75 93107 94285 + GT2
pfam k141_132363 k141_132363_76 94289 95221 - 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC k141_132363 k141_132363_77 95328 96938 - 3.A.1.121.4
pfam k141_132363 k141_132363_78 96977 97831 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC k141_132363 k141_132363_79 97900 99849 - 9.B.18.2.1
Gene ID: k141_132363_70
Type: CAZyme
Location: 87360 - 88289 (+)
Gene ID: k141_132363_71
Type: TC
Location: 88294 - 89733 (+)
Gene ID: k141_132363_72
Type: CAZyme
Location: 89730 - 90893 (+)
Gene ID: k141_132363_73
Type: pfam
Location: 90926 - 92017 (+)
Gene ID: k141_132363_74
Type: pfam
Location: 92025 - 93101 (+)
Gene ID: k141_132363_75
Type: CAZyme
Location: 93107 - 94285 (+)
Gene ID: k141_132363_76
Type: pfam
Location: 94289 - 95221 (-)
Gene ID: k141_132363_77
Type: TC
Location: 95328 - 96938 (-)
Gene ID: k141_132363_78
Type: pfam
Location: 96977 - 97831 (-)
Gene ID: k141_132363_79
Type: TC
Location: 97900 - 99849 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_132363_77 vegetarian > omnivore 1.11687 0.03393

🧭 Explore Read Mapping of CGC

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