Cluster: CGMR089811_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR089811
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_208002 | k141_208002_8 | 8208 | 8969 | - | CBM63 |
| STP | k141_208002 | k141_208002_9 | 9079 | 9684 | - | TetR_N |
| TC | k141_208002 | k141_208002_10 | 9789 | 11435 | + | 3.A.1.5.34 |
| TC | k141_208002 | k141_208002_11 | 11432 | 12502 | + | 3.A.1.5.39 |
| TC | k141_208002 | k141_208002_12 | 12499 | 13359 | + | 3.A.1.5.39 |
| TC | k141_208002 | k141_208002_13 | 13356 | 15020 | + | 3.A.1.5.23 |
Gene ID: k141_208002_8
Type: CAZyme
Location: 8208 - 8969 (-)
Type: CAZyme
Location: 8208 - 8969 (-)
Gene ID: k141_208002_9
Type: STP
Location: 9079 - 9684 (-)
Type: STP
Location: 9079 - 9684 (-)
Gene ID: k141_208002_10
Type: TC
Location: 9789 - 11435 (+)
Type: TC
Location: 9789 - 11435 (+)
Gene ID: k141_208002_11
Type: TC
Location: 11432 - 12502 (+)
Type: TC
Location: 11432 - 12502 (+)
Gene ID: k141_208002_12
Type: TC
Location: 12499 - 13359 (+)
Type: TC
Location: 12499 - 13359 (+)
Gene ID: k141_208002_13
Type: TC
Location: 13356 - 15020 (+)
Type: TC
Location: 13356 - 15020 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Microbacteriaceae
Genus
Clavibacter
Species
Clavibacter michiganensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.