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Cluster: CGMR089811_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_312760 k141_312760_15 14043 15395 + CBM2 | GH5_1
pfam k141_312760 k141_312760_16 15473 17092 + MTS | PrmA | Methyltransf_11 | Methyltransf_25 | DUF7059
TC k141_312760 k141_312760_17 17102 17497 + 9.B.185.1.3
NULL(UNKNOWN) k141_312760 k141_312760_18 17517 17954 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_312760 k141_312760_19 18075 19076 + LacI
TC k141_312760 k141_312760_20 19180 20529 + 3.A.1.1.36
TC k141_312760 k141_312760_21 20624 21568 + 3.A.1.1.36
TC k141_312760 k141_312760_22 21565 22485 + 3.A.1.1.36
CAZyme k141_312760 k141_312760_23 22580 24118 + GH51_1
TC k141_312760 k141_312760_24 24189 25526 - 9.B.160.1.10
Gene ID: k141_312760_15
Type: CAZyme
Location: 14043 - 15395 (+)
Gene ID: k141_312760_16
Type: pfam
Location: 15473 - 17092 (+)
Gene ID: k141_312760_17
Type: TC
Location: 17102 - 17497 (+)
Gene ID: k141_312760_18
Type:
Location: 17517 - 17954 (-)
Gene ID: k141_312760_19
Type: TF
Location: 18075 - 19076 (+)
Gene ID: k141_312760_20
Type: TC
Location: 19180 - 20529 (+)
Gene ID: k141_312760_21
Type: TC
Location: 20624 - 21568 (+)
Gene ID: k141_312760_22
Type: TC
Location: 21565 - 22485 (+)
Gene ID: k141_312760_23
Type: CAZyme
Location: 22580 - 24118 (+)
Gene ID: k141_312760_24
Type: TC
Location: 24189 - 25526 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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