Cluster: CGMR089362_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR089362
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_171170 | k141_171170_8 | 8396 | 9823 | + | 9.B.18.1.2 |
| CAZyme | k141_171170 | k141_171170_9 | 9866 | 11014 | + | GT4 |
| pfam | k141_171170 | k141_171170_10 | 11041 | 11529 | + | Hexapep | Hexapep_2 |
| CAZyme | k141_171170 | k141_171170_11 | 11539 | 11820 | + | GT2 |
Gene ID: k141_171170_8
Type: TC
Location: 8396 - 9823 (+)
Type: TC
Location: 8396 - 9823 (+)
Gene ID: k141_171170_9
Type: CAZyme
Location: 9866 - 11014 (+)
Type: CAZyme
Location: 9866 - 11014 (+)
Gene ID: k141_171170_10
Type: pfam
Location: 11041 - 11529 (+)
Type: pfam
Location: 11041 - 11529 (+)
Gene ID: k141_171170_11
Type: CAZyme
Location: 11539 - 11820 (+)
Type: CAZyme
Location: 11539 - 11820 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes hadrus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_171170_8 | vegan > omnivore | 1.53785 | 0.00224 |
| k141_171170_8 | vegetarian > omnivore | 1.28881 | 0.03480 |