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Cluster: CGMR089206_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_298068 k141_298068_10 8538 10019 + 2.A.21.3.7
pfam k141_298068 k141_298068_11 10026 10622 + MMR_HSR1 | FeoB_N
NULL(UNKNOWN) k141_298068 k141_298068_12 10693 10884 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_298068 k141_298068_13 11157 12803 - 4.C.1.1.7
pfam k141_298068 k141_298068_14 12958 14271 + UPF0004 | Radical_SAM
pfam k141_298068 k141_298068_15 14295 15194 + Lip_A_acyltrans
CAZyme k141_298068 k141_298068_16 15197 16219 + GT2
TC k141_298068 k141_298068_17 16233 16940 - 1.B.44.1.1
Gene ID: k141_298068_10
Type: TC
Location: 8538 - 10019 (+)
Gene ID: k141_298068_11
Type: pfam
Location: 10026 - 10622 (+)
Gene ID: k141_298068_12
Type:
Location: 10693 - 10884 (-)
Gene ID: k141_298068_13
Type: TC
Location: 11157 - 12803 (-)
Gene ID: k141_298068_14
Type: pfam
Location: 12958 - 14271 (+)
Gene ID: k141_298068_15
Type: pfam
Location: 14295 - 15194 (+)
Gene ID: k141_298068_16
Type: CAZyme
Location: 15197 - 16219 (+)
Gene ID: k141_298068_17
Type: TC
Location: 16233 - 16940 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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