Cluster: CGMR089206_CGC28
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR089206
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_345383 | k141_345383_47 | 70044 | 71219 | + | CBM32 |
| TF | k141_345383 | k141_345383_48 | 71478 | 72470 | + | LacI |
| pfam | k141_345383 | k141_345383_49 | 72515 | 74290 | + | Fucose_iso_C | Fucose_iso_N1 | Fucose_iso_N2 |
| CAZyme | k141_345383 | k141_345383_50 | 74334 | 75536 | + | GH172 |
| TC | k141_345383 | k141_345383_51 | 75604 | 78747 | + | 1.B.14.6.1 |
| pfam | k141_345383 | k141_345383_52 | 78759 | 80567 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_345383 | k141_345383_53 | 80585 | 80995 | + | DUF4945 |
| TC | k141_345383 | k141_345383_54 | 81040 | 84093 | + | 1.B.14.6.1 |
| pfam | k141_345383 | k141_345383_55 | 84115 | 85908 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_345383 | k141_345383_56 | 85929 | 87206 | + | BT_3987-like_N |
| CAZyme | k141_345383 | k141_345383_57 | 87234 | 88247 | + | GH43_31 |
| CAZyme | k141_345383 | k141_345383_58 | 88254 | 89663 | + | GH183 |
| NULL(UNKNOWN) | k141_345383 | k141_345383_59 | 89685 | 90743 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_345383 | k141_345383_60 | 90771 | 91937 | + | GH172 |
| CAZyme | k141_345383 | k141_345383_61 | 91954 | 93045 | + | GH5_13 |
| CAZyme | k141_345383 | k141_345383_62 | 93095 | 94909 | + | GH20 |
| NULL(UNKNOWN) | k141_345383 | k141_345383_63 | 94909 | 96996 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_345383 | k141_345383_64 | 97028 | 98281 | + | DUF6786 |
| TC | k141_345383 | k141_345383_65 | 98294 | 99748 | + | 2.A.1.7.1 |
Gene ID: k141_345383_47
Type: CAZyme
Location: 70044 - 71219 (+)
Type: CAZyme
Location: 70044 - 71219 (+)
Gene ID: k141_345383_48
Type: TF
Location: 71478 - 72470 (+)
Type: TF
Location: 71478 - 72470 (+)
Gene ID: k141_345383_49
Type: pfam
Location: 72515 - 74290 (+)
Type: pfam
Location: 72515 - 74290 (+)
Gene ID: k141_345383_50
Type: CAZyme
Location: 74334 - 75536 (+)
Type: CAZyme
Location: 74334 - 75536 (+)
Gene ID: k141_345383_51
Type: TC
Location: 75604 - 78747 (+)
Type: TC
Location: 75604 - 78747 (+)
Gene ID: k141_345383_52
Type: pfam
Location: 78759 - 80567 (+)
Type: pfam
Location: 78759 - 80567 (+)
Gene ID: k141_345383_53
Type: pfam
Location: 80585 - 80995 (+)
Type: pfam
Location: 80585 - 80995 (+)
Gene ID: k141_345383_54
Type: TC
Location: 81040 - 84093 (+)
Type: TC
Location: 81040 - 84093 (+)
Gene ID: k141_345383_55
Type: pfam
Location: 84115 - 85908 (+)
Type: pfam
Location: 84115 - 85908 (+)
Gene ID: k141_345383_56
Type: pfam
Location: 85929 - 87206 (+)
Type: pfam
Location: 85929 - 87206 (+)
Gene ID: k141_345383_57
Type: CAZyme
Location: 87234 - 88247 (+)
Type: CAZyme
Location: 87234 - 88247 (+)
Gene ID: k141_345383_58
Type: CAZyme
Location: 88254 - 89663 (+)
Type: CAZyme
Location: 88254 - 89663 (+)
Gene ID: k141_345383_59
Type:
Location: 89685 - 90743 (+)
Type:
Location: 89685 - 90743 (+)
Gene ID: k141_345383_60
Type: CAZyme
Location: 90771 - 91937 (+)
Type: CAZyme
Location: 90771 - 91937 (+)
Gene ID: k141_345383_61
Type: CAZyme
Location: 91954 - 93045 (+)
Type: CAZyme
Location: 91954 - 93045 (+)
Gene ID: k141_345383_62
Type: CAZyme
Location: 93095 - 94909 (+)
Type: CAZyme
Location: 93095 - 94909 (+)
Gene ID: k141_345383_63
Type:
Location: 94909 - 96996 (+)
Type:
Location: 94909 - 96996 (+)
Gene ID: k141_345383_64
Type: pfam
Location: 97028 - 98281 (+)
Type: pfam
Location: 97028 - 98281 (+)
Gene ID: k141_345383_65
Type: TC
Location: 98294 - 99748 (+)
Type: TC
Location: 98294 - 99748 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
JAAYFB01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.