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Cluster: CGMR089206_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_348042 k141_348042_7 3080 4609 - PL1_2
pfam k141_348042 k141_348042_8 4632 5999 - GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme k141_348042 k141_348042_9 6038 8341 - CE8 | PL1_2
CAZyme k141_348042 k141_348042_10 8362 9537 - GH105
CAZyme k141_348042 k141_348042_11 9542 10333 - CE12
CAZyme k141_348042 k141_348042_12 10326 12056 - GH28
pfam k141_348042 k141_348042_13 12214 13770 - fn3 | DUF4957 | DUF5123
pfam k141_348042 k141_348042_14 13786 15546 - SusD_RagB | SusD-like_3
TC k141_348042 k141_348042_15 15566 18772 - 1.B.14.6.1
Gene ID: k141_348042_7
Type: CAZyme
Location: 3080 - 4609 (-)
Gene ID: k141_348042_8
Type: pfam
Location: 4632 - 5999 (-)
Gene ID: k141_348042_9
Type: CAZyme
Location: 6038 - 8341 (-)
Gene ID: k141_348042_10
Type: CAZyme
Location: 8362 - 9537 (-)
Gene ID: k141_348042_11
Type: CAZyme
Location: 9542 - 10333 (-)
Gene ID: k141_348042_12
Type: CAZyme
Location: 10326 - 12056 (-)
Gene ID: k141_348042_13
Type: pfam
Location: 12214 - 13770 (-)
Gene ID: k141_348042_14
Type: pfam
Location: 13786 - 15546 (-)
Gene ID: k141_348042_15
Type: TC
Location: 15566 - 18772 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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