Cluster: CGMR088681_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR088681
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_189267 | k141_189267_31 | 24341 | 25951 | + | 3.A.1.20.3 |
| TC | k141_189267 | k141_189267_32 | 25953 | 26876 | + | 3.A.1.20.2 |
| CAZyme | k141_189267 | k141_189267_33 | 26873 | 28087 | + | GT4 |
| NULL(UNKNOWN) | k141_189267 | k141_189267_34 | 28577 | 28906 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_189267 | k141_189267_35 | 28984 | 29886 | - | CE14 |
| NULL(UNKNOWN) | k141_189267 | k141_189267_36 | 29896 | 30660 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_189267 | k141_189267_37 | 30701 | 32503 | - | 1.B.52.2.2 |
| TC | k141_189267 | k141_189267_38 | 32859 | 34115 | + | 2.A.1.52.2 |
Gene ID: k141_189267_31
Type: TC
Location: 24341 - 25951 (+)
Type: TC
Location: 24341 - 25951 (+)
Gene ID: k141_189267_32
Type: TC
Location: 25953 - 26876 (+)
Type: TC
Location: 25953 - 26876 (+)
Gene ID: k141_189267_33
Type: CAZyme
Location: 26873 - 28087 (+)
Type: CAZyme
Location: 26873 - 28087 (+)
Gene ID: k141_189267_34
Type:
Location: 28577 - 28906 (+)
Type:
Location: 28577 - 28906 (+)
Gene ID: k141_189267_35
Type: CAZyme
Location: 28984 - 29886 (-)
Type: CAZyme
Location: 28984 - 29886 (-)
Gene ID: k141_189267_36
Type:
Location: 29896 - 30660 (-)
Type:
Location: 29896 - 30660 (-)
Gene ID: k141_189267_37
Type: TC
Location: 30701 - 32503 (-)
Type: TC
Location: 30701 - 32503 (-)
Gene ID: k141_189267_38
Type: TC
Location: 32859 - 34115 (+)
Type: TC
Location: 32859 - 34115 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.