Cluster: CGMR088681_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR088681
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_212186 | k141_212186_2 | 2189 | 3727 | - | 2.A.66.4.5 |
| pfam | k141_212186 | k141_212186_3 | 3805 | 4641 | - | SLH |
| CAZyme | k141_212186 | k141_212186_4 | 4811 | 6568 | - | CBM50 |
| pfam | k141_212186 | k141_212186_5 | 7196 | 9475 | - | SLH | SLH | SLH | Flg_new |
| NULL(UNKNOWN) | k141_212186 | k141_212186_6 | 9780 | 11327 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_212186 | k141_212186_7 | 11811 | 13814 | + | 1.B.52.2.2 |
| TC | k141_212186 | k141_212186_8 | 14561 | 15679 | - | 3.D.2.3.1 |
Gene ID: k141_212186_2
Type: TC
Location: 2189 - 3727 (-)
Type: TC
Location: 2189 - 3727 (-)
Gene ID: k141_212186_3
Type: pfam
Location: 3805 - 4641 (-)
Type: pfam
Location: 3805 - 4641 (-)
Gene ID: k141_212186_4
Type: CAZyme
Location: 4811 - 6568 (-)
Type: CAZyme
Location: 4811 - 6568 (-)
Gene ID: k141_212186_5
Type: pfam
Location: 7196 - 9475 (-)
Type: pfam
Location: 7196 - 9475 (-)
Gene ID: k141_212186_6
Type:
Location: 9780 - 11327 (-)
Type:
Location: 9780 - 11327 (-)
Gene ID: k141_212186_7
Type: TC
Location: 11811 - 13814 (+)
Type: TC
Location: 11811 - 13814 (+)
Gene ID: k141_212186_8
Type: TC
Location: 14561 - 15679 (-)
Type: TC
Location: 14561 - 15679 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.