Cluster: CGMR088557_CGC8
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR088557
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_50738 | k141_50738_2 | 1151 | 2443 | - | 9.B.1.1.2 |
| pfam | k141_50738 | k141_50738_3 | 2458 | 3168 | + | RNase_T |
| TC | k141_50738 | k141_50738_4 | 3208 | 5187 | - | 9.B.142.2.10 |
| pfam | k141_50738 | k141_50738_5 | 5343 | 5609 | - | Ribosomal_L31 |
| CAZyme | k141_50738 | k141_50738_6 | 5879 | 8761 | - | GT2 |
| CAZyme | k141_50738 | k141_50738_7 | 9191 | 10846 | + | GH17 |
| NULL(UNKNOWN) | k141_50738 | k141_50738_8 | 10956 | 11327 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_50738 | k141_50738_9 | 11333 | 12592 | - | 3.A.6.1.1 |
Gene ID: k141_50738_2
Type: TC
Location: 1151 - 2443 (-)
Type: TC
Location: 1151 - 2443 (-)
Gene ID: k141_50738_3
Type: pfam
Location: 2458 - 3168 (+)
Type: pfam
Location: 2458 - 3168 (+)
Gene ID: k141_50738_4
Type: TC
Location: 3208 - 5187 (-)
Type: TC
Location: 3208 - 5187 (-)
Gene ID: k141_50738_5
Type: pfam
Location: 5343 - 5609 (-)
Type: pfam
Location: 5343 - 5609 (-)
Gene ID: k141_50738_6
Type: CAZyme
Location: 5879 - 8761 (-)
Type: CAZyme
Location: 5879 - 8761 (-)
Gene ID: k141_50738_7
Type: CAZyme
Location: 9191 - 10846 (+)
Type: CAZyme
Location: 9191 - 10846 (+)
Gene ID: k141_50738_8
Type:
Location: 10956 - 11327 (-)
Type:
Location: 10956 - 11327 (-)
Gene ID: k141_50738_9
Type: TC
Location: 11333 - 12592 (-)
Type: TC
Location: 11333 - 12592 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Lautropia
Species
Lautropia mirabilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.