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Cluster: CGMR088557_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_132884 k141_132884_1 2 1090 + 8.A.3.1.2
STP k141_132884 k141_132884_2 1093 2064 + AAA
pfam k141_132884 k141_132884_3 2087 3571 + Polysacc_synt | Polysacc_synt_3
CAZyme k141_132884 k141_132884_4 3568 4575 + CE4
CAZyme k141_132884 k141_132884_5 4586 5740 + GT2
CAZyme k141_132884 k141_132884_6 5745 8246 + GT4 | GT4
peptidase k141_132884 k141_132884_7 8230 10089 + C44.UNW
CAZyme k141_132884 k141_132884_8 10109 11302 + GT4
peptidase k141_132884 k141_132884_9 11306 13204 + C44.UPW
CAZyme k141_132884 k141_132884_10 13204 14238 + CE4
Gene ID: k141_132884_1
Type: TC
Location: 2 - 1090 (+)
Gene ID: k141_132884_2
Type: STP
Location: 1093 - 2064 (+)
Gene ID: k141_132884_3
Type: pfam
Location: 2087 - 3571 (+)
Gene ID: k141_132884_4
Type: CAZyme
Location: 3568 - 4575 (+)
Gene ID: k141_132884_5
Type: CAZyme
Location: 4586 - 5740 (+)
Gene ID: k141_132884_6
Type: CAZyme
Location: 5745 - 8246 (+)
Gene ID: k141_132884_7
Type: peptidase
Location: 8230 - 10089 (+)
Gene ID: k141_132884_8
Type: CAZyme
Location: 10109 - 11302 (+)
Gene ID: k141_132884_9
Type: peptidase
Location: 11306 - 13204 (+)
Gene ID: k141_132884_10
Type: CAZyme
Location: 13204 - 14238 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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